Table 1 The top 10 upregulated and downregulated lncRNAs
Upregulated lncRNAs | Downregulated lncRNAs | ||||
Sequence name | Gene symbol | Fold change | Sequence name | Gene symbol | Fold change |
NR_024543 | SNHG7 | 19.3 | NR_033203 | HOXB-AS3 | 32.1 |
NR_038108 | SNHG16 | 18.5 | T105469 | G024903 | 25.4 |
T117110 | G027615 | 17.2 | NR_033877 | LINC00548 | 19.8 |
T117111 | G027616 | 15.8 | T377350 | G089269 | 14.8 |
ENST00000606186 | RP4-680D5.8 | 9.1 | NR_039989 | MIR4458HG | 11.0 |
ENST00000430859 | AC005083.1 | 9.0 | NR_110078 | UBXN10-AS1 | 10.7 |
NR_109758 | LOC644919 | 8.3 | NR_110845 | LOC101928674 | 10.7 |
TCONS_00019861 | XLOC_009079 | 7.2 | NR_120685 | LINC01503 | 10.5 |
ENST00000602939 | RP11-395P17.11 | 7.1 | T232938 | G053602 | 10.1 |
NR_034119 | LINC00460 | 6.9 | NR_034121 | CKMT2-AS1 | 9.2 |
Upregulated mRNAs | Downregulated mRNAs | ||||
Gene symbol | Fold change | Gene symbol | Fold change | ||
LCP1 | 90.2 | IGFBP3 | 59.3 | ||
S100P | 60.6 | GLI3 | 56.5 | ||
CNN3 | 50.8 | PTGR1 | 46.2 | ||
TPM2 | 46.6 | ISM2 | 44.3 | ||
GALNT7 | 43.7 | ZAP70 | 37.7 | ||
GALNT1 | 40.6 | RGCC | 33.1 | ||
CA9 | 39.9 | ARL4C | 33.1 | ||
GYLTL1B | 34.4 | CADM1 | 32.9 | ||
GPX2 | 32.0 | TBC1D4 | 30.8 | ||
MFNG | 31.9 | KRT85 | 27.8 | ||