Table 2 CircRNA databases
From: The functions and clinical significance of circRNAs in hematological malignancies
| Name | Website address | Description | Ref. |
|---|---|---|---|
| circBase | https://circbase.org/ | A public dataset of thousands of circRNAs in eukaryotic cells | [127] |
| circInteractome | https://circinteractome.nia.nih.gov/ | A computational tool enabling the prediction and mapping of binding sites for RBPs and miRNAs on reported circRNAs | [128] |
| CIRCpedia V2 | https://www.picb.ac.cn/rnomics/circpedia/ | An updated comprehensive database containing circRNA annotations from over 180 RNA-seq datasets across six different species | [129] |
| circRNADb | https://reprod.njmu.edu.cn/cgi-bin/circrnadb/circRNADb.php | A comprehensive database of circular RNA molecules in humans | [130] |
| CSCD | https://gb.whu.edu.cn/CSCD | An integrated interactional database of cancer-specific circRNAs | [131] |
| exoRBase | https://www.exoRBase.org | A repository of circRNA, lncRNA and mRNA derived from RNA-seq data analyses of human blood exosomes | [132] |
| MiOncoCirc | https://mioncocirc.github.io/ | A compendium of circular RNAs compiled from cancer clinical samples | [133] |
| CircAtlas 2.0 | https://circatlas.biols.ac.cn/ | A database of over one million of circRNAs across 6 species (human, macaca, mouse, rat, pig, chicken) and tissues | [134] |
| CircBank | https://www.circbank.cn/index.html | A comprehensive database of human circRNA including more than 140,000 human annotated circRNA from different source | [135] |
| NoncoRNA | https://www.ncdtcdb.cn:8080/NoncoRNA/ | A database for experimentally supported ncRNA and drug target associations in cancer | [136] |