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Evidence of SARS-CoV-2 spike protein on retrieved thrombi from COVID-19 patients
Journal of Hematology & Oncology volume 15, Article number: 108 (2022)
The pathophysiology of COVID-19-associated coagulopathy is complex and not fully understood. SARS-CoV-2 spike protein (SP) may activate platelets and interact with fibrin(ogen). We aimed to investigate whether isolated SP can be present in clots retrieved in COVID-19 patients with acute ischemic stroke (by mechanical thrombectomy) and myocardial infarction. In this pilot study, we could detect SP, but not nucleocapsid protein, on platelets of COVID-19 patients’ thrombi. In addition, in all three COVID-19 thrombi analyzed for molecular biology, no SARS-CoV-2 RNA could be detected by real-time polymerase chain reaction. These data could support the hypothesis that free SP, besides the whole virus, may be the trigger of platelet activation and clot formation in COVID-19.
To the Editor,
Thrombotic complications are common features of coronavirus disease 2019 (COVID-19), but the underlying pathogenesis is not fully elucidated yet. It has been observed that the spike protein (SP), namely the protruding membrane protein of SARS-CoV-2, may activate the coagulation cascade by binding angiotensin-converting enzyme 2 (ACE2) directly on platelets and/or endothelial cells . Additionally, the isolated circulating SP may induce a hypercoagulability status by directly interacting with fibrin/fibrinogen . Noteworthy, free SP fragments have been found in plasma of COVID-19 patients . SARS-CoV-2 has been detected rarely in thrombi retrieved from brain arteries of acute ischemic stroke (AIS) patients  and more frequently in those retrieved from coronary arteries of acute myocardial infarct (AMI) patients . Few data on SP detection in thrombi retrieved from stroke patients have been reported . We aimed to investigate whether isolated SP can be present in clots retrieved by endovascular treatment in COVID-19 patients with AIS and AMI.
The study was conducted on patients admitted to the Emergency Department of Policlinico Umberto I Hospital, University of Rome La Sapienza, from March 2020 to April 2021. Among a series of consecutive adult patients with large vessel occlusion (LVO)-related AIS or with AMI and a concomitant diagnosis of COVID-19, we retrospectively selected patients with thrombus available for histological analysis. The diagnosis of COVID-19 was based on the positive results of SARS-CoV-2 on real-time reverse transcription polymerase chain reaction (RT-PCR) analysis of nasopharyngeal swab specimens. Unfortunately, we do not have data on the SARS-CoV-2 strain because we did not perform the sequencing for the COVID-19 patients included in the study. However, considering the period (April and October/November 2020) when diagnosis of SARS-CoV-2 infection was made, it is very likely that COVID-19 in these patients was caused by the initial Wuhan variant of the virus. As control, we used thrombi retrieved from patients with LVO AIS not affected by COVID-19. After collection, thrombi were immediately fixed in 10% formalin and embedded in paraffin. Sections were stained with hematoxylin and eosin. Immunohistochemical staining was performed using two different antibodies: SARS-CoV-2 SP (rabbit polyclonal anti-SARS-CoV-2 SP—Cell Signaling Technology, Boston, MA, USA, cat. #56996, dil. 1:100) and nucleocapsid protein (NP) (monoclonal anti-SARS/SARS-CoV-2 (B46F)—Invitrogen, Rockford USA, MA1-7404, dil. 1:200). The positive control consisted of a lung section available from a patient with COVID-19. A double immunofluorescence was performed to colocalize platelets with SARS-CoV-2 SP, using the primary antibodies, anti-CD61 (Monoclonal Mouse Anti-Human CD61, Platelet Glycoprotein IIIa/APC, Clone Y2/51, dil. 1:100) and anti-SARS-CoV-2 SP, visualized, respectively, with Goat anti-Mouse Alexa Fluor 594 (dil. 1:300) and donkey anti-rabbit Alexa Fluor 488 (dil. 1:300) (Thermo Fisher). The nuclei were stained with DAPI. Morphologic and immunohistochemical findings were assessed by two of the authors (GD and ML).
SARS-CoV-2 RNA extraction from clots was carried out by using Total RNA Purification Kit (Norgen Biotek Corp.), according to the manufacturer’s instructions. Viral RNA was amplified for the qualitative detection of SARS-CoV-2 RNA using a real-time RT-PCR system (FTD SARS-CoV-2 test, Siemens Healthineers), as previously described .
We enrolled four COVID-19-positive patients: three with LVO AIS (mean age 67 [± 11] years; 3 males) (one out of three patients was also treated with intravenous thrombolysis) and one affected by AMI (43 years old, male). All COVID-19 patients had lung ground-glass opacity on pulmonary CT scan. We included a control group of four LVO AIS without COVID-19 (mean age 69.8 [± 11] years; 3 males), with three of them receiving intravenous thrombolysis (Additional file 1: Table S1).
The relative amount of platelets and fibrin/red blood cells did not significantly differ from COVID-19 thrombi and controls. COVID-19 thrombi retrieved from cerebral arteries showed mild positivity for SP, whereas SP immunostaining was more marked in the COVID-19 thrombus retrieved from anterior descending coronary artery (Fig. 1, Panel 1 A, C). Interestingly, in the clot of the AMI patient, immunostaining for CD61 was patchy, yet substantially overlapped with SP (Additional file 1: Fig. S1). Neither cerebral nor coronary artery thrombi showed cells positive for NP (Fig. 1, Panel 1 B, D). As for comparison, Fig. 1 Panel 2 reports representative immunohistochemical staining for SP and NP which was positive for both (E and F, respectively) in the lung of a patient affected by COVID-19 (positive control) and negative (G and H, respectively) in a thrombus retrieved from the middle cerebral artery of a patient not affected by COVID-19 (negative control).
Finally, to characterize the cellular population expressing SP we performed a double-immunostaining with antibody against CD61 and we found that most of the SP colocalized with platelets (Fig. 1, Panel 3).
No SARS-CoV-2 RNA could be identified in three COVID + thrombi analyzed with RT-PCR.
No specific differences in the coagulation parameters (Table 1) as well as in demographics and clinical characteristics (Additional file 1: Table S1) were observed between AIS with and without COVID-19 and between AIS patients and the AMI patient with COVID-19. Except for the common vascular risk factors, based on our available data, apparently, there were no other possible specific triggers of thrombosis. In particular, none of the study patients was on heparin therapy prior to the admission (Table 1).
The main limitation of this study was the very limited sample size which prevented us from drawing definite conclusions. However, in our opinion, the present data could support the hypothesis that free SP, besides the whole virus, may be the trigger of platelet [1, 2] and endothelial  activation, and clot formation in COVID-19. This event could precede or run in parallel with the recently hypothesized spike-specific immune-complex (IC)-mediated platelet activation in COVID-19 critically ill patients [9, 10]. An aberrant glycosylation of these ICs also seems to increase platelet thrombus formation . Another limitation of our study is that we did not perform confocal microscopy analysis. To the best of our knowledge, only one other group has recently looked at the presence of SP in thrombi retrieved from 6 AIS patients, nevertheless, with negative results . The different type of anti-SP antibodies used (monoclonal versus polyclonal in our study) as well as the different burden of COVID-19 on stroke pathogenesis may be plausible explanations. In addition, a possibly diverse genetically determined ACE2 receptor expression on platelets and endothelial cells could also justify the different chance to find SP in clots. Larger studies are needed to confirm our findings.
Availability of data and materials
The data of this report are available from the corresponding author upon reasonable requests.
Reverse transcription polymerase chain reaction
Angiotensin-converting enzyme 2
Coronavirus disease 2019
Acute ischemic stroke
Acute myocardial infarct
Large vessel occlusion
Zhang S, Liu Y, Wang X, Yang L, Li H, Wang Y, et al. SARS-CoV-2 binds platelet ACE2 to enhance thrombosis in COVID-19. J Hematol Oncol. 2020;13(1):120.
Grobbelaar LM, Venter C, Vlok M, Ngoepe M, Laubscher GJ, Lourens PJ, et al. SARS-CoV-2 spike protein S1 induces fibrin(ogen) resistant to fibrinolysis: implications for microclot formation in COVID-19. Biosci Rep. 2021;41(8):BSR20210611.
Ogata AF, Maley AM, Wu C, Gilboa T, Norman M, Lazarovits R, et al. Ultra-sensitive serial profiling of SARS-CoV-2 antigens and antibodies in plasma to understand disease progression in COVID-19 patients with severe disease. Clin Chem. 2020;66(12):1562–72.
Genchi A, Semerano A, Schwarz G, Dell’Acqua B, Gullotta GS, Sampaolo M, et al. Neutrophils predominate the immune signature of cerebral thrombi in COVID-19 stroke patients. Acta Neuropathol Commun. 2022;10(1):14.
Marfella R, Paolisso P, Sardu C, Palomba L, D’Onofrio N, Cesaro A, et al. SARS-COV-2 colonizes coronary thrombus and impairs heart microcirculation bed in asymptomatic SARS-CoV-2 positive subjects with acute myocardial infarction. Crit Care. 2021;25(1):217.
Perico L, Morigi M, Galbusera M, Pezzotta A, Gastoldi S, Imberti B, et al. SARS-CoV-2 spike protein 1 activates microvascular endothelial cells and complement system leading to platelet aggregation. Front Immunol. 2022;13:827146.
Desilles JP, Solo Nomenjanahary M, Consoli A, Ollivier V, Faille D, Bourrienne MC, et al. Impact of COVID-19 on thrombus composition and response to thrombolysis: insights from a monocentric cohort population of COVID-19 patients with acute ischemic stroke. J Thromb Haemost. 2022;20(4):919–28.
Oliva A, Cancelli F, Brogi A, Curtolo A, Savelloni G, Siccardi G, et al. Convalescent plasma for haematological patients with SARS-CoV-2 pneumonia and severe depletion of B-cell lymphocytes following anti-CD20 therapy: a single-centre experience and review of the literature. New Microbiol. 2022;45(1):62–72.
Nazy I, Jevtic SD, Moore JC, Huynh A, Smith JW, Kelton JG, et al. Platelet-activating immune complexes identified in critically ill COVID-19 patients suspected of heparin-induced thrombocytopenia. J Thromb Haemost. 2021;19(5):1342–7.
Jevtic SD, Nazy I. The COVID complex: a review of platelet activation and immune complexes in COVID-19. Front Immunol. 2022;13:807934.
Bye AP, Hoepel W, Mitchell JL, Jégouic S, Loureiro S, Sage T, et al. Aberrant glycosylation of anti-SARS-CoV-2 spike IgG is a prothrombotic stimulus for platelets. Blood. 2021;138(16):1481–9.
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Ethics approval and consent to participate
The study was approved by the Policlinico Umberto I Hospital’s Ethic Committee, and informed consent was obtained from all participants.
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Additional file 1
. Supplementary Table. Demographics and other clinical characteristics of the study patients. Supplementary Figure. Representative images of serial sections of the clot from the COVID-19 patient with acute myocardial infarction, stained for spike protein (SP) and CD61 for platelets identification.
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De Michele, M., d’Amati, G., Leopizzi, M. et al. Evidence of SARS-CoV-2 spike protein on retrieved thrombi from COVID-19 patients. J Hematol Oncol 15, 108 (2022). https://doi.org/10.1186/s13045-022-01329-w